Update InputsPlotFiles.rst

as whether the EB geometry or level set should be written out, and if the particles should be written out in Ascii

format (for debugging).

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

|                      | Description                                                           |   Type      | Default   |

+=====================+=======================================================================+=============+===========+

+======================+=======================================================================+=============+===========+

| plot_int             | Frequency of plotfile output;                                         |    Int      | -1        |

|                      | if -1 then no plotfiles will be written at this frequency             |             |           |

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| plot_per_approx      | Time period of plotfile output (approximate); does not modify dt      |    Real     | -1        |

|                      | if -1 then no plotfiles will be written at this frequency             |             |           |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| plotfile_on_restart  | Should we write a plotfile when we restart (only used if plot_int>0)  |   Bool      | False     |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| plot_file            | Prefix to use for plotfile output                                     |  String     | plt       |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| write_ls             | Should we write a plotfile holding the level set and volfrac?         |   Bool      | False     |

|                      | If true, it will only be written once,after initialization or restart |             |           |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| write_eb_surface     | Should we write out the EB geometry in vtp format                     |   Bool      | False     |

|                      | If true, it will only be written once,after initialization or restart |             |           |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| par_ascii_file       | Prefix to use for ascii particle output                               |  String     | par       |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| par_ascii_int        | Frequency of ascii particle output;                                   |    Int      | -1        |

|                     | if -1 then no plotfiles will be written                               |             |           |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

|                      | if -1 then no particle ascii files will be written                    |             |           |

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| par_ascii_per_approx | Time period of the ascii particle output (approximate);               |    Real     | -1        |

|                      | if -1 then particle ascii files will not be written at this frequency |             |           |

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| ascent_int           | Frequency of ascent pipeline;                                         |    Int      | -1        |

|                      | if -1 then ascent will not be called.                                 |             |           |

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

| ascent_per_approx    | Time period of the ascent pipeline (approximate);                     |    Real     | -1        |

|                      | if -1 then ascent will not be called.                                 |             |           |

+---------------------+-----------------------------------------------------------------------+-------------+-----------+

+----------------------+-----------------------------------------------------------------------+-------------+-----------+

The following inputs must be preceded by "amr" and control what variables will be written in plotfiles.